DALEL
Exhaustive search for linear information in proteins
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Scenario 3
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Positives (fasta format) : proteins exhibiting a common behaviour, e.g. binding to a common partner
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Background (fasta format) : ensemble of proteins to which positives and negatives belong, e.g. proteome
proteome
homo sapiens
saccharomyces cerevisiae
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Negatives (fasta format) : proteins lacking the behaviour common in positives
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Motifs parameters
min length
03
04
05
06
07
max length
8
9
10
11
12
z-score cut-off
01
02
03
04
05
06
07
08
09
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Sequences parameters
max homology
50%
60%
70%
80%
90%
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